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Risk SNP-Mediated Promoter-Enhancer Switching Drives Prostate Cancer through lncRNA PCAT19

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成果类型:
期刊论文
作者:
Hua, Junjie Tony;Ahmed, Musaddeque;Guo, Haiyang;Zhang, Yuzhe;Chen, Sujun;...
通讯作者:
He, Housheng Hansen
作者机构:
[Zhang, Yuzhe; Soares, Fraser; Lupien, Mathieu; Zhou, Stanley; Guo, Haiyang; Hua, Junjie Tony; Patel, Parasvi S.; Lu, Jennifer; He, Housheng Hansen; Chen, Sujun; Wang, Miranda; Tsao, Ming-Sound; Liang, Yi; Ahmed, Musaddeque] Univ Hlth Network, Princess Margaret Canc Ctr, Toronto, ON M5G IL7, Canada.
[Boutros, Paul C.; Lupien, Mathieu; Zhou, Stanley; Hua, Junjie Tony; Patel, Parasvi S.; He, Housheng Hansen; Chen, Sujun; Tsao, Ming-Sound] Univ Toronto, Dept Med Biophys, Toronto, ON M5G 2M9, Canada.
[Zhang, Yuzhe] Cent China Normal Univ, Coll Life Sci, Wuhan, Hubei, Peoples R China.
[Zhang, Yuzhe] Dali Univ, Coll Basic Med Sci, Dali, Yunnan, Peoples R China.
[Lu, Jennifer] Univ Toronto, Dept Lab Med & Pathobiol, Toronto, ON M5S IA1, Canada.
通讯机构:
[He, Housheng Hansen] U
Univ Hlth Network, Princess Margaret Canc Ctr, Toronto, ON M5G IL7, Canada.
Univ Toronto, Dept Med Biophys, Toronto, ON M5G 2M9, Canada.
语种:
英文
关键词:
bifunctional regulatory element;HNRNPAB;lncRNA;NKX3.1;PCAT19;promoter-enhancer switching;prostate cancer progression;risk SNP;rs11672691;YY1
期刊:
Cell
ISSN:
0092-8674
年:
2018
卷:
174
期:
3
页码:
564-575.e18
基金类别:
The authors thank the Princess Margaret Genomic Centre for high-throughput sequencing support. The work was supported by the Princess Margaret Cancer Foundation ( 886012001223 to H.H.H.), Canada Foundation for Innovation and Ontario Research Fund ( CFI32372 to H.H.H.), NSERC discovery grant ( 498706 to H.H.H.), WICC Ontario 20th Anniversary Prostate Cancer Innovation Grant of the CCS ( 703800 to H.H.H.), CIHR operating grant ( 142246 to H.H.H.), Movember discovery grant ( D2016-1115 to H.H.H.) and Rising Star awards from Prostate Cancer Canada ( RS2014-01 to P.C.B. and RS2016-1022 to H.H.H.). H.H.H. holds a TFRI New Investigator Award, an OMIR Early Researcher Award, and a CIHR New Investigator Salary Award. J.T.H. is supported by the CIHR Graduate Student Doctoral Fellowship ( GSD146249 ). H.L. is supported by the Department of Defense (DOD) (grant W81XWH-17-1-0192 ). The results shown here are in whole or in part based upon data generated by the TCGA Research Network.
机构署名:
本校为其他机构
院系归属:
生命科学学院
摘要:
The prostate cancer (PCa) risk-associated SNP rs11672691 is positively associated with aggressive disease at diagnosis. We showed that rs11672691 maps to the promoter of a short isoform of long noncoding RNA PCAT19 (PCAT19-short), which is in the third intron of the long isoform (PCAT19-long). The risk variant is associated with decreased and increased levels of PCAT19-short and PCAT19-long, respectively. Mechanistically, the risk SNP region is bifunctional with both promoter and enhancer activity. The risk variants of rs11672691 and its LD SNP...

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