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Chromosome-level genome of black cutworm provides novel insights into polyphagy and seasonal migration in insects

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成果类型:
期刊论文
作者:
Jin, Minghui;Liu, Bo;Zheng, Weigang;Liu, Conghui;Liu, Zhenxing;...
通讯作者:
Kongming Wu<&wdkj&>Wei Fan<&wdkj&>Yutao Xiao
作者机构:
[Xiao, Yutao; Liu, Conghui; Liu, Zhenxing; Fan, Wei; Jin, Minghui; Wang, Ping; Liu, Bo; Wu, Chao; Wu, Shigang; Liu, Hangwei; He, Yuan; Chakrabarty, Swapan; Zheng, Weigang] Chinese Acad Agr Sci, Agr Genom Inst Shenzhen, Key Lab Gene Editing Technol Hainan, Shenzhen Branch,Guangdong Lab Lingnan Modern Agr,M, Shenzhen, Peoples R China.
[Jin, Minghui; Wu, Kongming; He, Yuan; Li, Xiaokang] Chinese Acad Agr Sci, Inst Plant Protect, State Key Lab Biol Plant Dis & Insect Pests, Beijing 100193, Peoples R China.
[Yuan, Haibin; Zheng, Weigang] Jilin Agr Univ, Coll Agron, Changchun 130118, Peoples R China.
[Liu, Conghui] Univ Hong Kong, Dept Clin Oncol, Hong Kong 999077, Peoples R China.
[Liu, Kaiyu] Cent China Normal Univ, Sch Life Sci, Wuhan 430079, Peoples R China.
通讯机构:
[Kongming Wu] T
[Wei Fan; Yutao Xiao] S
The State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China<&wdkj&>Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Key Laboratory of Gene Editing Technologies (Hainan), Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China<&wdkj&>Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Key Laboratory of Gene Editing Technologies (Hainan), Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
语种:
英文
关键词:
Genome assembly;Comparative genomics;Transcriptome;Host adaptation;Migration;Cutworm
期刊:
BMC Biology
ISSN:
1741-7007
年:
2023
卷:
21
期:
1
页码:
1-17
基金类别:
This work was supported by the Shenzhen Science and Technology Program (JCYJ20200109150629266, JCYJ20190813115612564) and the National Science Foundation of China (32001944). The funders had no role in the study design, data collection and analysis, decision to publish, or manuscript preparation.
机构署名:
本校为其他机构
院系归属:
生命科学学院
摘要:
BACKGROUND: The black cutworm, Agrotis ipsilon, is a serious global underground pest. Its distinct phenotypic traits, especially its polyphagy and ability to migrate long distances, contribute to its widening distribution and increasing difficulty of control. However, knowledge about these traits is still limited. RESULTS: We generated a high-quality chromosome-level assembly of A. ipsilon using PacBio and Hi-C technology with a contig N50 length of ~ 6.7Mb. Comparative genomic and transcriptomic analyses showed that detoxification-associated...

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