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A Hierarchical Classification Model for Annotating Antibacterial Biocide and Metal Resistance Genes via Fusing Global and Local Semantics

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成果类型:
会议论文
作者:
Lv, Xing;Deng, Jie;Zhao, Weizhong;Tu, Xinhui;Jiang, Xingpeng
通讯作者:
Zhao, WZ
作者机构:
[Lv, Xing; Tu, Xinhui; Zhao, Weizhong; Zhao, WZ; Deng, Jie; Jiang, Xingpeng] Cent China Normal Univ, Hubei Prov Key Lab Artificial Intelligence & Smar, Wuhan 430079, Hubei, Peoples R China.
[Lv, Xing; Tu, Xinhui; Zhao, Weizhong; Zhao, WZ; Deng, Jie; Jiang, Xingpeng] Cent China Normal Univ, Sch Comp, Wuhan 430079, Hubei, Peoples R China.
[Tu, Xinhui; Zhao, Weizhong; Zhao, WZ; Jiang, Xingpeng] Cent China Normal Univ, Natl Language Resources Monitoring & Res Ctr Netw, Wuhan 430079, Hubei, Peoples R China.
通讯机构:
[Zhao, WZ ] C
Cent China Normal Univ, Hubei Prov Key Lab Artificial Intelligence & Smar, Wuhan 430079, Hubei, Peoples R China.
Cent China Normal Univ, Sch Comp, Wuhan 430079, Hubei, Peoples R China.
Cent China Normal Univ, Natl Language Resources Monitoring & Res Ctr Netw, Wuhan 430079, Hubei, Peoples R China.
语种:
英文
关键词:
Antibacterial resistant genes;Biocide and metal resistance;Hierarchical classification;Deep learning;Multi-task learning
期刊:
Lecture Notes in Computer Science
ISSN:
0302-9743
年:
2024
卷:
14955
页码:
398-409
会议名称:
20th International Symposium on Bioinformatics Research and Applications (ISBRA)
会议论文集名称:
Lecture Notes in Bioinformatics
会议时间:
JUL 19-21, 2024
会议地点:
Kunming, PEOPLES R CHINA
会议主办单位:
[Lv, Xing;Deng, Jie;Zhao, Weizhong;Tu, Xinhui;Jiang, Xingpeng] Cent China Normal Univ, Hubei Prov Key Lab Artificial Intelligence & Smar, Wuhan 430079, Hubei, Peoples R China.^[Lv, Xing;Deng, Jie;Zhao, Weizhong;Tu, Xinhui;Jiang, Xingpeng] Cent China Normal Univ, Sch Comp, Wuhan 430079, Hubei, Peoples R China.^[Zhao, Weizhong;Tu, Xinhui;Jiang, Xingpeng] Cent China Normal Univ, Natl Language Resources Monitoring & Res Ctr Netw, Wuhan 430079, Hubei, Peoples R China.
主编:
Cai, Z Peng, W Skums, P
出版地:
152 BEACH ROAD, #21-01/04 GATEWAY EAST, SINGAPORE, 189721, SINGAPORE
出版者:
SPRINGER-VERLAG SINGAPORE PTE LTD
ISBN:
978-981-97-5130-3; 978-981-97-5131-0
基金类别:
National Natural Science Foundation of China [62372205, 61932008]; Fundamental Research Funds for Central Universities [KJ02502022-0450]; National High-end Foreign Expert Cooperation Project [G2022158003L]; Natural Science Foundation of Hubei Province of China [2022CFB289]
机构署名:
本校为第一且通讯机构
院系归属:
计算机学院
摘要:
Bacteria with resisting antibacterial biocide and metal agents have become a commonly global concern for public health and environment protection. Since the resistance of bacteria is mainly attributed to expression of certain genes, accurately annotating the antibacterial biocide and metal resistance genes is the fundamental step to address or mitigate the global concern. However, due to the complex biological mechanisms of bacterial resistance for antibacterial biocides and metals, existing prediction methods face challenges in accurately categorizing antibacterial biocide and metal resistanc...

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