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Bioactive conformation analysis of cyclic imides as protoporphyrinogen oxidase inhibitor by combining DFT calculations, QSAR and molecular dynamic simulations

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成果类型:
期刊论文
作者:
Zhang, Li;Hao, Ge-Fei;Tan, Yin;Xi, Zhen*;Huang, Ming-Zhi;...
通讯作者:
Xi, Zhen
作者机构:
[Yang, Guang-Fu; Zhang, Li; Tan, Yin; Hao, Ge-Fei] Cent China Normal Univ, Minist Educ, Key Lab Pesticide & Chem Biol, Wuhan 430079, Peoples R China.
[Xi, Zhen; Tan, Yin] Nankai Univ, State Key Lab Elementoorgan Chem, Tianjin 300071, Peoples R China.
[Huang, Ming-Zhi] Hunan Res Inst Chem Ind, Changsha 410007, Hunan, Peoples R China.
通讯机构:
[Xi, Zhen] N
Nankai Univ, State Key Lab Elementoorgan Chem, Tianjin 300071, Peoples R China.
语种:
英文
关键词:
Bioactive conformation;DFT;Molecular dynamic simulations;PPO;QSAR
期刊:
Bioorganic & Medicinal Chemistry
ISSN:
0968-0896
年:
2009
卷:
17
期:
14
页码:
4935-4942
基金类别:
The present work was supported in part by the National NSFC (Nos. 20872045 and 20872033), the Research Fund for the Doctoral Program of Higher Education (No. 20060511003), and Hunan Provincial Natural Science Foundation of China (No. 07JJ1003).
机构署名:
本校为第一机构
院系归属:
化学学院
摘要:
Bioactive conformation of drugs is one of the key points for understanding the ligand-receptor interactions. In the present study, by combining density functional theory-based (DFT-based) conformation analysis with quantitative structure-activity relationship analysis (QSAR), we developed successfully a new approach (DFT/QSAR) to carry out bioactive conformation analyses for a series of 25 cyclic imide derivatives as protoporphyrinogen oxidase (PPO) inhibitors. Further potential energy surface scan, molecular docking and molecular dynamic simul...

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