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Structural analyses reveal that MBD3 is a methylated CG binder.

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成果类型:
期刊论文
作者:
Liu, Ke;Lei, Ming;Wu, Zhibin;Gan, Bing;Cheng, Harry;...
通讯作者:
Min, Jinrong
作者机构:
[Wu, Zhibin; Gan, Bing; Lei, Ming; Liu, Ke; Min, Jinrong] Cent China Normal Univ, Hubei Key Lab Genet Regulat & Integrat Biol, Sch Life Sci, Wuhan 430079, Hubei, Peoples R China.
[Cheng, Harry; Li, Yanjun; Lei, Ming; Liu, Ke; Min, Jinrong] Univ Toronto, Struct Genom Consortium, Toronto, ON, Canada.
[Min, Jinrong] Univ Toronto, Dept Physiol, Toronto, ON, Canada.
通讯机构:
[Min, Jinrong] C
Cent China Normal Univ, Hubei Key Lab Genet Regulat & Integrat Biol, Sch Life Sci, Wuhan 430079, Hubei, Peoples R China.
语种:
英文
关键词:
5-methylcytosine;DNA methylation;MBD domain;MBD3;X-ray crystallography
期刊:
FEBS JOURNAL
ISSN:
1742-464X
年:
2019
卷:
286
期:
16
页码:
3240-3254
基金类别:
We thank Wolfram Tempel for structure determination and manuscript reading. We thank Amy Wernimont for reviewing some earlier versions of crystallographic models. Results shown in this report are derived from work performed at Argonne National Laboratory, Structural Biology Center (SBC) at the Advanced Photon Source. SBC-CAT is operated by UChicago Argonne, LLC, for the U.S. Department of Energy, Office of Biological and Environmental Research under contract DE-AC02-06CH11357. The SGC is a registered charity (number 1097737) that receives funds from AbbVie, Bayer Pharma AG, Boehringer Ingelheim, Canada Foundation for Innovation, Eshelman Institute for Innovation, Genome Canada through Ontario Genomics Institute [OGI-055], Innovative Medicines Initiative (EU/EFPIA) [ULTRA-DD grant no. 115766], Janssen, Merck KGaA, Darmstadt, Germany, MSD, Novartis Pharma AG, Ontario Ministry of Research, Innovation and Science (MRIS), Pfizer, São Paulo Research Foundation-FAPESP, Takeda, and Wellcome. This work is also supported by National Natural Science Foundation of China (No.31770834 and 31300629).
机构署名:
本校为第一且通讯机构
院系归属:
生命科学学院
摘要:
The MBD3, a methyl-CpG-binding domain (MBD)-containing protein, is a core subunit of the Mi-2/NuRD complex. Recent reports show that MBD3 recognizes both methylated CG (mCG)- and hydroxymethylated CG (hmCG)-containing DNA, with a preference for hmCG. However, whether the MBD3-MBD indeed has methyl-CG-binding ability is controversial. In this study, we provided the structural basis to support the ability of MBD3-MBD to bind mCG-containing DNA. We found that the MBD3-MBD bound to mCG-containing DNA through two conserved arginine fingers, and pref...

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